Search results from ICTS-TIFR
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Gabriel MindlinICTS:31573
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Neuromechanics of insect pollination: tactile sensing and learning in nocturnal insects
Tanvi DeoraICTS:31569 -
Intrinsic and circuit mechanisms of predictive coding in a grid cell network model
Collins AssisiICTS:31538 -
Computing with Rhythms: The search for Deep Oscillatory Neural Networks
V Srinivasa ChakravarthyICTS:31537 -
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TL I: Dynamical Systems and artificial intelligence applied to data modelling in biological problems
Gabriel MindlinICTS:31572 -
Interferometric Data Analysis (Advanced Calibration and Imaging) Demo and Hands-on
Arnab Chakraborty, Narendra Nath Patra & Nirupam RoyICTS:31530 -
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Interferometric Data Analysis (Flagging, Calibration, Imaging) Demo and Hands-on
Arnab Chakraborty, Narendra Nath Patra & Nirupam RoyICTS:31461 -
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TL II: Dynamical Systems and artificial intelligence applied to data modelling in biological problems.
Gabriel MindlinICTS:31573Nonlinear dynamics aims to elucidate the basic mechanisms necessary to reflect the temporal behavior of a natural system. The data analysis and modeling techniques proposed by artificial intelligence (deep networks, computational reservoirs, recurrent networks, as examples), on the other hand, ostensibly resign the mechanistic vision for a data-oriented modeling paradigm. In these lectures, these apparently antagonistic approaches will be analyzed in parallel, using as examples my work on the physics of birdsong production and vocal learning.
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Neuromechanics of insect pollination: tactile sensing and learning in nocturnal insects
Tanvi DeoraICTS:31569How insects find and feed on flowers is crucial for plant pollination. Plants provide several chemical and visual cues to attract insects. However, even as insects find their host flowers, they have the additional challenge of targeting a tiny nectary opening on floral surfaces to reach the sugary reward. This becomes especially challenging for moths and butterflies because they use a long and flexible mouthpart called proboscis to draw the nectary. Additionally, nocturnal hawkmoths feed while hovering in front of flowers, often at very low lights levels during nighttime. How do moths target the tiny nectary hole in flowers, despite the low visual resolution of the nectary opening? We tracked the motion of hawkmoth proboscis as they fed from artificial, 3D-printed flowers and show that hawkmoths systematically explore floral surfaces to detect tactile features such as curvatures to target the nectary. We found that over repeated visits, they preferentially explore in ways that increases the efficiency of finding the nectary. Systematic exploration and targeting objects in the environment require expert control over appendage movements. How do hawkmoths sense and control the proboscis motion to achieve such precise movements? Pilifers are paired bristled organs at the proboscis base and are well placed to provide proprioceptive feedback about relative movements of the proboscis. To study the role of pilifers as proprioceptive organs, we drove lateral motions of the proboscis in anaesthetized head-fixed moths while simultaneously recording neural responses from the pilifer nerve. Our recordings reveal that pilifer mechanosensory neurons are sensitive to lateral motions, either to the left or to the right. Like other mechanosensory organs, they respond extremely rapidly, often within a few milliseconds. We build neural models which reveal that the neural filtering properties such as the stimulus feature and selectivity function of the pilifer mechosensors are strikingly like other insect mechanosensors, including the strain sensors on wings and halteres, abdominal mechanosensors etc. suggesting an important role for sensor mechanics and motion in encoding relevant information.
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Intrinsic and circuit mechanisms of predictive coding in a grid cell network model
Collins AssisiICTS:31538Grid cells in the medial entorhinal cortex (MEC) fire when an animal is located at the vertices of a hexagonal grid that extends across the environment. The population activity of grid cells serves as an allocentric representation of the current location of the animal. Recent studies have identified a class of grid cells that represent locations ahead of the animal. How do these predictive representations emerge from the wetware of the MEC? To address this question, we developed a detailed conductance-based model of the MEC network, constrained by existing data on the biophysical properties of stellate cells and the topology of the MEC network. Our model revealed two mechanisms underlying the emergence of a predictive code in the MEC. The first relied on a time scale associated with the HCN conductance. The other depended on the degree of asymmetry in the topology of the MEC network. The former mechanism was sufficient to explain predictive coding in layer II grid cells that represented locations shifted ahead of the current location. The shift was equivalent to ~5% of the diameter of a grid field. The latter mechanism was required to model predictive representations in layer III grid cells that were shifted forward by a distance of ~25% of the diameter of a grid field. A corollary of our model, that the extent of the predictive code changes monotonically along the dorsoventral axis of the MEC following observed changes in the properties of the HCN conductance, is borne out by recent experiments.
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Computing with Rhythms: The search for Deep Oscillatory Neural Networks
V Srinivasa ChakravarthyICTS:31537Oscillatory phenomena are ubiquitous in the brain. Although there are oscillator-based models of brain dynamics, they do not seem to enjoy the universal computational properties of rate-coded and spiking neuron network models. Use of oscillator-based models is often limited to special phenomena like locomotor rhythms and oscillatory attractor-based memories. If neuronal ensembles are taken to be the basic functional units of brain dynamics, it is desirable to develop oscillator-based models that can explain a wide variety of neural phenomena. To this end, we aim to develop a generalized network of oscillatory neurons. Specifically we propose a novel neural network architecture consisting of Hopf oscillators described in the complex domain. The oscillators can adapt their intrinsic frequencies by tracking the frequency components of the input signals. The oscillators are also laterally connected with each other through a special form of coupling we labeled as “power coupling”. Power coupling allows two oscillators with arbitrarily different intrinsic frequencies to interact at a constant normalized phase difference. The network can be operated in two phases. In the encoding phase the oscillators comprising the network perform a Fourier-like decomposition of the input signal(s). In the reconstruction phase, outputs the trained oscillators are combined to reconstruct the training signals. As a salient example, the network can be trained to reconstruct Electroencephalogram (EEG) signals, paving the way to an exciting class of large scale brain models.
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Rhythmic Neural Oscillations Underlying Birdsong
Ana AmadorICTS:31543Birdsong is a complex motor activity that arises from the interaction between the central and peripheral nervous systems, the body, and the environment. Its striking similarities to human speech, both in production and learning, make songbirds powerful animal models for studying learned motor skills. In this talk, I will present an interdisciplinary approach to understanding the emergence of behavior. Specifically, I will show neuronal recordings from a telencephalic region involved in sensorimotor integration, revealing well-defined oscillations in local field potentials synchronized with the rhythmic structure of canary (Serinus canaria) song. I will introduce a low-dimensional mathematical model of a neural network that replicates the neural dynamics observed in the experiments. This work highlights the value of low-dimensional models as tools for exploring the neuroscience of perception and generation of complex motor behaviors.
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TL I: Dynamical Systems and artificial intelligence applied to data modelling in biological problems
Gabriel MindlinICTS:31572Nonlinear dynamics aims to elucidate the basic mechanisms necessary to reflect the temporal behavior of a natural system. The data analysis and modeling techniques proposed by artificial intelligence (deep networks, computational reservoirs, recurrent networks, as examples), on the other hand, ostensibly resign the mechanistic vision for a data-oriented modeling paradigm. In these lectures, these apparently antagonistic approaches will be analyzed in parallel, using as examples my work on the physics of birdsong production and vocal learning.
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Interferometric Data Analysis (Advanced Calibration and Imaging) Demo and Hands-on
Arnab Chakraborty, Narendra Nath Patra & Nirupam RoyICTS:31530TBA
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Advanced topics in Calibration and Imaging (Spectral imaging, MS, MFS, Self-calibration, DD calibration)
Nirupam RoyICTS:31464TBA
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Extragalactic radio survey science (Online)
Mark T. SargentICTS:31465The next generation of extragalactic surveys will reveal the full diversity of the galaxy assembly process: from environment-dependent evolution to the build-up of mass inside galaxies, and with a complete accounting of all relevant processes/constituents ensured by multi-wavelength coverage. Observations at radio wavelengths carry a unique potential in that they can probe star-formation activity and cold gas content, i.e. place constraints on both galaxy growth rates and the fuel for future galaxy growth. With the construction of the Square Kilometre Array (SKA), radio astronomy will enter a new era; high-sensitivity, high-resolution and dust-unbiased radio imaging will provide a confusion-free census of star formation and black hole activity, regardless of whether these occur in dust-obscured or optically thin regions. I will review the high-priority science cases developed by the SKA extragalactic continuum science working group and outline the challenges brought about by our still only partial understanding of some of the astrophysical mechanisms producing radio emission (e.g. the relation between star formation rate and radio continuum luminosity).
Thanks to an order of magnitude increase in survey speed compared to existing radio telescopes, SKA surveys will detect millions of galaxies. I will summarize how - in addition to advancing our understanding of the drivers of the cosmic star-formation history - commensal survey design will ensure that information on galaxy shapes, redshifts, spatial distribution and polarization can be used for cosmological studies and to trace the evolution of magnetic fields in galaxies and the cosmic web. -
Interferometric Data Analysis (Flagging, Calibration, Imaging) Demo and Hands-on
Arnab Chakraborty, Narendra Nath Patra & Nirupam RoyICTS:31461TBA
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